Evidence mapPaperPMID 42322381Full record

ArticleBioresources and bioprocessing2026

Unveiling the therapeutic potential of gut microbiota metabolites for the treatment of renal fibrosis based on network pharmacology study.

Weiguo Yao, Jinlin Huo, Kun Liu, Pengyu Tao

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Article in Bioresources and bioprocessing, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Weiguo Yao *Department of Nephrology, Jinshan District Central Hospital Affiliated to Shanghai University of Medicine and Health Sciences, Shanghai, China.
Jinlin Huo *Clinical Medical Research Center, The First Affiliated Hospital of Shantou University Medical College, Shantou, China.
Kun LiuDepartment of Nephrology, Jinshan District Central Hospital Affiliated to Shanghai University of Medicine and Health Sciences, Shanghai, China.
Pengyu TaoDepartment of Nephrology, Jinshan District Central Hospital Affiliated to Shanghai University of Medicine and Health Sciences, Shanghai, China. 1120821481@qq.com.

Funding

Shanghai 14th Five-Year Plan TCM Characteristic Specialty Construction Project ZYTSZK2-13Shanghai District-Level Comprehensive (Specialized) Hospital's Integrated Traditional Chinese and Western Medicine Specialty Capacity QJZXYJK-202408Shanghai Famous Traditional Chinese Medicine Academic Experience Research Studio Construction Project SHGZS-202237The Seventh Cycle Key Medical Specialty Establishment Project in Jinshan District of Shanghai JSZK2023H04
6 · The paper itself

Abstract

backgroundRenal fibrosis is a progressive injury contributing to renal function deterioration. Mounting evidence has underscored the profound impact of gut microbiota metabolites on host health and disease, yet their underlying mechanisms against renal fibrosis remain unclear. The aim of this study was to fully elucidate their therapeutic potential in the context of renal fibrosis.

methodsThe targets of gut microbiota metabolites were identified in gutMGene. The diseases targets were obtained from the OMIM, GeneCards and DisGeNet databases. The STRING and DAVID platform were employed to identify the core targets and pathways. Gut Microbiota-Targets-Pathway-Metabolites (G-T-P-M) network was constructed to screen the core metabolites. Molecular docking was used to assess the interactions between the targets and metabolites.

resultsA total of 47 overlapping targets related to gut microbiota metabolites and renal fibrosis were acquired. The bioinformatics analysis indicated that the targets were enriched in the regulation of TNF pathway and Toll-like receptor pathway. The PPI network (Protein-Protein Interaction) identified JUN, IL6, IL1B and AKT1 as the core targets. The G-T-P-M network revealed that Propionate, Butyrate and 3-Indolepropionic acid were identified as the core non-toxic and promising core metabolites. The core metabolites showed stable binding affinity with the core targets.

conclusionThe findings highlight that gut microbiota metabolites represent a promising therapeutic option for combating renal fibrosis by modulating multiple targets and pathways, providing a theoretical foundation for the future studies exploring gut microbiota as targeted strategies in the prevention and treatment of renal fibrosis.

Indexed as

Bioinformatics analysisGut microbiotaMetabolitesNetwork pharmacologyRenal fibrosis

Identifiers

PMID42322381
PMCPMC13283118

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.