Evidence map›Paper›PMID 42339316›Full record

ArticleGut microbes reports2026

Species-level virome profiling reveals compositional differences in the gut prokaryotic DNA virome of people with HIV-1 on antiretroviral therapy.

Ji Zhang, Andreas Matussek, Anders Sönnerborg, Xiangning Bai

Abstract read
In one paragraph

Article in Gut microbes reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ji ZhangFonterra Research and Development Centre, Palmerston North, New Zealand.
Andreas MatussekDepartment of Microbiology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
Anders SönnerborgDepartment of Medicine Huddinge, Centre for Infectious Medicine, Karolinska Institutet, Huddinge, Sweden.
Xiangning BaiDepartment of Medicine Huddinge, Centre for Infectious Medicine, Karolinska Institutet, Huddinge, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alterations in the gut bacterial communities are well described in people with HIV-1 (PWH). However, less is known about the gut viral communities (virome). Herein, we performed an exploratory study of the gut DNA virome in PWH receiving antiretroviral therapy (PWH-ART). Virome profiling was performed using two complementary viral taxa identification pipelines, MetaPhlAn4 and Phanta, providing high-resolution taxonomic profiles at the species level. Consistent patterns of the gut DNA virome were obtained with both pipelines, though Phanta identified a greater number of viral taxa at the species level. Most gut DNA viruses were unclassified species, and bacteriophages constituted the majority of identifiable viral populations. Compared to HIV-1 negative controls (

Indexed as

antiretroviral therapybacteriophagesGut viromeHIV-1prokaryotic DNA viruses

Identifiers

PMID42339316
PMCPMC13285549

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.