Evidence map›Paper›PMID 42396501›Full record

ArticleResearch square2026

VRC01-CLASS PRECURSOR FREQUENCY IN AN AFRICAN POPULATION IS INFLUENCED BY IGHV1-2 ALLELIC COMPOSITION AND NOT MALARIA EXPOSURE.

Michelle K Muthui, Caleb Kibet, Charity Muriuki, Yiakon Sein, Sharon Owuor, Roselyn Kinoti, Wilfrida Ogonda, Michael Muteti, Oleksandr Kalyuzhniy, John Kimotho and 19 more

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Michelle K MuthuiKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Caleb KibetInternational AIDS Vaccine Initiative (IAVI), Nairobi, Kenya.
Charity MuriukiKAVI -Institute of Clinical Research, University of Nairobi, Nairobi, Kenya.
Yiakon SeinKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Sharon OwuorKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Roselyn KinotiKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Wilfrida OgondaKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Michael MutetiKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Oleksandr KalyuzhniyIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
John KimothoKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Makobu KimaniKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Brenda KamauKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
David C OwuorKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Troy SincombIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
Kelly RamkoKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.
Judie MaguraAfrica Health Research Institute (AHRI), Durban, South Africa.
Alfred MuiaKEMRI Centre for Clinical Research (KEMRI-CCR), Nairobi, Kenya.
Lynn NamwosoKEMRI Centre for Clinical Research (KEMRI-CCR), Nairobi, Kenya.
John OrimboAhero Clinical Trials Unit, CREATES/KEMRI-CCR, Kisumu, Kenya.
Christopher A CottrellIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
Omu AnzalaKAVI -Institute of Clinical Research, University of Nairobi, Nairobi, Kenya.
Bernhards OgutuKEMRI Centre for Clinical Research (KEMRI-CCR), Nairobi, Kenya.
Elise LandaisIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
Linda MurungiInternational AIDS Vaccine Initiative (IAVI), Nairobi, Kenya.
Devin SokIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
William R SchiefIAVI Neutralizing Antibody Centre, The Scripps Research Institute, La Jolla, California, USA.
Thumbi NdunguAfrica Health Research Institute (AHRI), Durban, South Africa.
Daniel MuemaKAVI -Institute of Clinical Research, University of Nairobi, Nairobi, Kenya.
Eunice W NduatiKenya Medical Research Institute (KEMRI)-Wellcome Trust Research Programme, Kilifi, Kenya.

Funding

Identification of neutralizing epitopes on SARS-CoV-2 spike for design of vaccines and small-molecule antiviralsUM1AI144462 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 2019 to 2025
$201.6M
Bill & Melinda Gates Foundation INV-007522Bill & Melinda Gates Foundation INV-008813Bill & Melinda Gates Foundation INV-033558Bill & Melinda Gates Foundation INV-034657NIAID NIH HHS UM1 AI144462Wellcome Trust
6 · The paper itself

Abstract

Recent innovations in vaccine design have reignited optimism about the feasibility of developing a safe and effective HIV vaccine. For instance, germline-targeting (GT) immunogens have been designed to selectively expand naïve B cell precursors with broadly neutraliing antibodies (bnAbs)-associated germline-encoded features, thereby priming them for structure-guided maturation. The frequencies and affinities of these precursors in the populations targeted for vaccination are critical to the success of GT vaccine strategies, but limited information is currently available across different geographies and demographics. We set up a study to characterise CD4 binding site-targeting VRC01-class bnAb precursor frequencies in 60 healthy Kenyan adults with varied levels of prior exposure to malaria. Naïve VRC01-class bnAb precursors were detected using the germline-targeting eOD-GT8 immunogen. The overall frequency of these precursors was similar to that reported in North American populations, with IGHV1-2 allelic composition rather than prior long-term exposure to malaria impacting the precursor frequency estimates. Our findings also revealed four new allelic variants of the IGHV1-2 gene that are not currently included in the immunogenetic reference database. Notably, a novel IGHV1-2 allele (IGHV1-2*06_S5416) demonstrated the ability to engage eOD-GT8, unlike the reference *06 allele. Overall, our results support the development of GT vaccines to induce VRC01-class bnAbs in this population and reiterate the need for participant genotyping in GT vaccine trials, particularly in African populations where genetic diversity is high yet understudied.

Identifiers

PMID42396501
PMCPMC13321274

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.