Evidence map›Paper›PMID 42400669›Full record

ArticleMolecular biology reports2026

Development of a CRISPR/dCas9-based membrane-assisted colorimetric assay for detection of high-risk HPV16 and HPV18: a proof-of-concept study.

Vaibhav Kumar Tamrakar, Kuldeep Sharma, Pushpendra Singh, Anudita Bhargava, Pushpawati Thakur, Sanjay Singh Negi

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Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Vaibhav Kumar Tamrakar *Department of Microbiology, All India Institute of Medical Sciences, Raipur, 492099, Chhattisgarh, India.ORCID http://orcid.org/0000-0001-9067-2406
Kuldeep Sharma *State-Level Virus Research and Diagnostic Laboratory, Department of Microbiology, All India Institute of Medical Sciences, Raipur, 492099, Chhattisgarh, India.ORCID http://orcid.org/0000-0001-9756-4483
Pushpendra SinghState-Level Virus Research and Diagnostic Laboratory, Department of Microbiology, All India Institute of Medical Sciences, Raipur, 492099, Chhattisgarh, India.ORCID http://orcid.org/0000-0002-9619-0659
Anudita BhargavaDepartment of Microbiology, All India Institute of Medical Sciences, Raipur, 492099, Chhattisgarh, India.ORCID http://orcid.org/0000-0001-6079-5421
Pushpawati ThakurObstetrics & Gynaecology, All India Institute of Medical Sciences Raipur, Raipur, Chhattisgarh, India.
Sanjay Singh NegiDepartment of Microbiology, All India Institute of Medical Sciences, Raipur, 492099, Chhattisgarh, India. negidr@yahoo.co.in.ORCID http://orcid.org/0000-0002-5292-9132

Funding

Indian Council of Medical Research Extramural Grant IIPR-2030-3960/F1.
6 · The paper itself

Abstract

BACKGROUND AND

aimsPersistent infection with high-risk human papillomavirus (HR-HPV), particularly HPV16 and HPV18, is the leading cause of cervical cancer. While molecular diagnostics offer high sensitivity, their deployment in decentralized settings remains limited. This study presents a proof-of-concept CRISPR/dCas9-based membrane-assisted detection platform for HR-HPV genotyping.

methodsA membrane-based assay integrating recombinase polymerase amplification (RPA) with CRISPR/dCas9-mediated sequence-specific recognition was developed. FAM-labeled amplicons were captured by immobilized dCas9-sgRNA ribonucleoprotein complexes and detected via antibody-mediated colorimetric readout.

resultsThe assay enabled specific detection of HPV16 and HPV18 using genotype-specific sgRNAs, producing visually interpretable signals on a nitrocellulose membrane. No signal was observed in negative controls, demonstrating high analytical specificity. Semi-quantitative signal assessment confirmed clear differentiation between positive and negative samples.

conclusionThis study demonstrates the feasibility of a CRISPR/dCas9-based membrane-assisted detection system for HR-HPV genotyping. While not yet configured as a fully integrated lateral flow device, the platform provides a foundation for future development of simplified, point-of-care molecular diagnostics.

Indexed as

ColorimetryCRISPR-Cas SystemsHuman papillomavirus 16Human papillomavirus 18Papillomavirus InfectionsFemaleGenotypeGenotyping TechniquesHumansProof of Concept StudyRapid Diagnostic TestsSensitivity and SpecificityCervical cancerCRISPR/dCas9High-Risk Human Papillomavirus (HR-HPV)Lateral flow assay(LFA)Point-of-care diagnostics

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.