Evidence map›Paper›PMID 42406898›Full record

ArticlePlant physiology2026

The primary nitrate response TGA1 and TGA4 transcription factors are negative regulators of sulfate uptake and metabolism.

Suvajit Basu, Varsa Shukla, Ira Trivedi, Pengxin Yu, Hanna Bechtel, Anna Koprivova, Agnieszka Sirko, Anna Wawrzyńska, Daniela Ristova

Abstract read
In one paragraph

Article in Plant physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Suvajit BasuInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0009-0006-8611-5379
Varsa ShuklaInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0009-0001-5829-0966
Ira TrivediInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0009-0003-1726-9671
Pengxin YuInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0009-0004-8402-3150
Hanna BechtelInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0009-0007-3229-9755
Anna KoprivovaInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0000-0001-8168-4536
Agnieszka SirkoLaboratory of Plant Protein Homeostasis, Institute of Biochemistry and Biophysics Polish Academy of Sciences, Pawińskiego 5a, Warsaw 02-106, Poland.ORCID 0000-0002-5205-2924
Anna WawrzyńskaLaboratory of Plant Protein Homeostasis, Institute of Biochemistry and Biophysics Polish Academy of Sciences, Pawińskiego 5a, Warsaw 02-106, Poland.ORCID 0000-0002-6985-3904
Daniela RistovaInstitute for Plant Sciences, University of Cologne, Zülpicher Str. 47b, Cologne 50674, Germany.ORCID 0000-0001-8353-7687

Funding

Cluster of Excellence on Plant Sciences 456082119DAADDeutsche Forschungsgemeinschaft 390686111
6 · The paper itself

Abstract

Although the synergistic effects of nitrogen (N) and sulfur (S) on crop performance are well established, the regulatory network integrating these pathways remains largely unknown. Clade I TGA transcription factors (TFs), TGA1 and TGA4, function within the second and third layers of the primary nitrate-responsive transcriptional cascade and are also implicated in immunity. Here we show that provision of nitrate rapidly induces sulfate uptake and assimilation through a yet undefined mechanism, followed by a delayed repression of SULTR1;2 mediated by clade I TGA transcription factors. In contrast, clade II TGAs and the nitrate signaling components NRT1.1 and NLP7 were not involved in this regulation. The binding analysis showed that both TGA1 and TGA4 bind to the promoter of the high-affinity sulfate transporter SULTR1;2, while in vivo assay confirmed that TGA1 and TGA4 repress the activity of AtSULTR1;1 and AtSULTR1;2 promoters. Genetic and biochemical analysis further revealed that clade I TGA TFs negatively regulate sulfur metabolism not only under nitrate provision, but also under sulfate starvation. Accordingly, the tga1 tga4 double mutant displayed enhanced sulfate uptake, increased cysteine accumulation, and improved fitness under long-term sulfate limitation. Additionally, TGA1 and TGA4 influenced sulfur-containing secondary metabolism, including indolic glucosinolates and camalexin during biotic stress. By coordinating sulfate acquisition with nitrogen signaling, clade I TGAs contribute to maintaining nutrient homeostasis and plant performance. This work advances our understanding of mineral nutrient integration in plants and provides new perspectives for improving nutrient use efficiency and stress resilience in crops.

Indexed as

ArabidopsisArabidopsis ProteinsNitratesSulfatesTranscription FactorsAnion Transport ProteinsGene Expression Regulation, PlantPromoter Regions, GeneticSulfurAnion Transport ProteinsArabidopsis ProteinsNitratesSulfatesSulfurTranscription Factors

Identifiers

PMID42406898
PMCPMC13524079

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.