Evidence map›Paper›PMID 42410622›Full record

ArticleArthritis research & therapy2026

Differential gene expression of retrotransposons (LTR and non-LTR) in peripheral blood leukocytes of people with gout.

Ya-Sian Chang, Ming-Hon Hsu, Chieh-Min Chang, Ta-Chih Liu, Jan-Gowth Chang

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Article in Arthritis research & therapy, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Ya-Sian ChangComputing Center for Precision Integration of Chinese and Western Genomic Medicines, Show Chwan Memorial Hospital, Changhua, Taiwan.
Ming-Hon HsuDepartment of Medical Laboratory Science and Biotechnology, China Medical University, Taichung, Taiwan.
Chieh-Min ChangPrecision Gene and Cell Center, Chang Bing Show Chwan Memorial Hospital, Changhua, Taiwan.
Ta-Chih LiuDepartment of Hematology-Oncology, Chang Bing Show Chwan Memorial Hospital, Changhua, Taiwan.
Jan-Gowth ChangComputing Center for Precision Integration of Chinese and Western Genomic Medicines, Show Chwan Memorial Hospital, Changhua, Taiwan. jgchang99@gmail.com.ORCID http://orcid.org/0000-0003-0375-1427

Funding

Hsinchu Science Park Bureau, National Science and Technology Council B11402Ministry of Science and Technology of Taiwan 114-2320-B-442-002
6 · The paper itself

Abstract

backgroundTo investigate the expression profiles of retrotransposons in people with gout and their clinical significance.

methodsPeripheral blood leukocytes from 92 people with gout and 22 healthy controls were analyzed using Telescope and TEspeX to quantify human endogenous retroviruses (HERVs) and non-long terminal repeat (non-LTR). Gene Set Variation Analysis (GSVA) was used to assess the association of the alterations of HERV and viral related gene panels, and xCell to evaluate the changes of immune cell subpopulations. HEK293 and THP-1 cells were treated with uric acid (UA) and monosodium urate (MSU) to explore and confirm the mechanisms of retrotransposon changes.

resultsA total of 238 HERVs and 49 non-LTR were differentially expressed in people with gout as compared to healthy controls. Notably, HERVs exhibited lower expression levels overall, whereas most non‑LTR retrotransposons showed higher expression in people with gout, suggesting distinct immunological triggers. Among 397 genes located near differentially expressed HERVs, several displayed altered expressions, indicating potential locus-specific co-regulation. GSVA revealed that gene panels related to HERV regulation, including nearby genes, KRAB zinc-finger proteins, and stemness-associated genes, were less enriched in gout patients compared to controls. xCell analysis revealed significant changes in immune cell composition, including reduced proportions of neutrophils and NK cells, and increased CD4 + memory T-cells and regulatory T cells, aligning with gout-related immune migration and modulation. Consistent with the transcriptomic data, our cell-based assays demonstrated that UA and MSU differentially modulate LTR and non-LTR retrotransposon expression across distinct cell types.

conclusionsThis study reveals a distinct and dynamic retrotransposon signature in gout, with potential implications priming, immune cell behavior, and gene regulation.

Indexed as

GoutLeukocytesRetroelementsTerminal Repeat SequencesAdultAgedEndogenous RetrovirusesFemaleGene Expression ProfilingGene Expression RegulationHEK293 CellsHumansMaleMiddle AgedRetroelementsGoutRetrotransposonsTelescopeTEspeXTotal RNA sequencing

Identifiers

PMID42410622
PMCPMC13617931

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.