Evidence mapPaperPMID 42414742Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2026

Identification of shared hub genes CTNNB1, TJP1, PTK2, and TP53 associated with endothelial proliferation in infantile hemangioma and glioblastoma.

Yanli Niu, Jing Li, Liang Wang, Duoduo Li

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Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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5 · Who and what money

Authors and funding

4 authors.

Yanli NiuDepartment of Vascular anomalies and Interventional Radiology, Ji'nan Children's Hospital (Children's Hospital Affiliated to Shandong University), Jingshi Road, Jinan, 250022, Shandong, China.
Jing LiDepartment of Vascular anomalies and Interventional Radiology, Ji'nan Children's Hospital (Children's Hospital Affiliated to Shandong University), Jingshi Road, Jinan, 250022, Shandong, China.
Liang WangDepartment of Vascular anomalies and Interventional Radiology, Ji'nan Children's Hospital (Children's Hospital Affiliated to Shandong University), Jingshi Road, Jinan, 250022, Shandong, China.
Duoduo LiDepartment of Pediatrics, The First Affiliated Hospital of Henan Medical University, No. 88 of Jiankang Road, Weihui, 453100, Henan, China. ldd414@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infantile hemangioma (IH) and glioblastoma multiforme (GBM) are clinically distinct but share vascular and proliferative characteristics. This study aimed to identify common transcriptional and regulatory mechanisms between IH and GBM to uncover potential hub genes driving disease progression. Transcriptomic datasets GSE127487 (IH) and GSE108476 (GBM) were analyzed using the limma package in R. Differentially expressed genes (DEGs) were overlapped to identify shared signatures. Protein-protein interaction networks were built using STRING and analyzed in Cytoscape to determine hub genes via CytoHubba. Gene expression, promoter methylation, mutation, and CNV data were validated using OncoDB, GEO2R, UALCAN, and cBioPortal. Functional enrichment and drug sensitivity analyses were performed using DAVID and GSCA. Experimental validation included siRNA knockdown or overexpression of target genes in HemSCs, HemECs, U87-MG, and LN229 cells, followed by RT-qPCR, western blot, proliferation, colony formation, and wound-healing assays. A total of 142 common DEGs were identified, with four hub genes, including TP53, CTNNB1, TJP1, and PTK2 showing consistent dysregulation. TP53 and CTNNB1 were upregulated, while TJP1 and PTK2 were downregulated in both IH and GBM. Methylation, mutation, and CNV analyses supported their regulatory involvement. Functional assays confirmed that CTNNB1 knockdown and TJP1/PTK2 overexpression suppressed proliferation and migration. This integrative study identifies CTNNB1, TJP1, PTK2, and TP53 as shared hub genes, highlighting common molecular regulators of endothelial proliferation and tumor-associated phenotypes in IH and GBM, and suggesting potential therapeutic targets.

Indexed as

beta CateninFocal Adhesion Kinase 1GlioblastomaHemangiomaTumor Suppressor Protein p53Cell Line, TumorCell ProliferationDNA MethylationGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansProtein Interaction Mapsbeta CateninCTNNB1 protein, humanFocal Adhesion Kinase 1PTK2 protein, humanTP53 protein, humanTumor Suppressor Protein p53GlioblastomaInfantile hemangiomaPrognosisProtein–protein interaction

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.