Evidence map›Paper›PMID 42418094›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2026

Ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry metabolomic profiling reveals harvest age dependent changes in the roots of Pelargonium sidoides DC.

Kundani Khameli, Muinat Nike Lewu, Takalani Mulaudzi, Oluwafemi Ayodeji Adebo, Oluwatobi Samuel Oluwafemi

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Article in Metabolomics : Official journal of the Metabolomic Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Kundani KhameliCentre for Innovative Food Research (CIFR), Department of Biotechnology and Food Technology, Faculty of Science, University of Johannesburg, P.O. Box 17011, Doornfontein Campus, Johannesburg, 2028, South Africa.ORCID http://orcid.org/0000-0002-4203-0203
Muinat Nike LewuSoil and Water Science Programme, Agricultural Research Council Infruitec-Nietvoorbij, Private Bag X5026, Stellenbosch, 7599, South Africa.ORCID http://orcid.org/0000-0002-8945-8100
Takalani MulaudziDepartment of Biotechnology, University of the Western Cape, Life Sciences Building, Private Bag X17, Bellville, 7535, South Africa.ORCID http://orcid.org/0000-0002-5792-1973
Oluwafemi Ayodeji AdeboCentre for Innovative Food Research (CIFR), Department of Biotechnology and Food Technology, Faculty of Science, University of Johannesburg, P.O. Box 17011, Doornfontein Campus, Johannesburg, 2028, South Africa. oadebo@uj.ac.za.ORCID http://orcid.org/0000-0002-3757-5137
Oluwatobi Samuel OluwafemiCentre for Nanomaterials Science Research, Department of Chemical Sciences, Faculty of Science, University of Johannesburg, Doornfontein Campus, P.O. Box 17011, Johannesburg, 2028, South Africa.ORCID http://orcid.org/0000-0001-8964-5646

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionCultivation of medicinal plants provides an opportunity for economic gain and health care accessibility. Ensuring consistent quality plant material is important for plants such as Pelargonium sidoides DC used for production of phytomedicines that are available in local and international markets. There is limited research on how agronomic factors affects phytochemicals in P. sidoides roots.

objectiveTo evaluate the effect of different irrigation regimes and harvesting age on metabolite accumulation in dried roots of P. sidoides. METHODOLOGY: Irrigation was applied at 75%, 50% and 25% plant available water (PAW) corresponding to well- watered, moderate water deficit and severe water deficit respectively. P. sidoides, which were harvested at 6, 12 and 18 months after imposing the different water deficit treatments, roots dried and subjected to ultra-performance liquid chromatography -quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) coupled with multivariate statistical analysis.

resultsUnsupervised multivariate analysis showed that irrigation did not affect the obtained metabolic features. Orthogonal partial least squares discriminant analysis (OPLS-DA) showed statistically significance difference between 6 versus 12- and 18- months harvest ages. Compounds such as umckalin, epigallocatechin dimer, and gallic acid were increased in 12 and 18 months compared to the 6 months harvest. Sucrose/trehalose was increased by 0.2431- and 0.560- fold in 6 months compared to 12- and 18-months harvest ages respectively. On quantification, umckalin increased from 260.40 mg/kg DW at 6 months to 431.61 mg/kg DW at 12 months, while epigallocatechin rose from 342.98 mg/kg DW to 505.58 mg/kg DW over the same period. Umckalin sulphate was highest at 6 months under 25% PAW (7110.32 mg/kg DW) and decreased at 12 months harvest under the same irrigation level (4522.05 mg/kg DW).

conclusionThe results indicated that younger plants accumulated more primary metabolites and modified secondary metabolites, whereas older plants accumulate more secondary metabolites. Moreover, cultivation of P. sidoides in limited water is plausible.

Indexed as

MetabolomicsPelargoniumPlant RootsChromatography, High Pressure LiquidLiquid Chromatography-Mass SpectrometryMass SpectrometryMetabolomeCoumarinsCultivationHarvest ageMetabolitesPelargonium sidoides

Identifiers

PMID42418094
PMCPMC13346132

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.