Evidence map›Paper›PMID 42444906›Full record

ArticleJournal of thoracic disease2026

Integrative single-cell and bulk transcriptomic analyses identify

Jinxiang Yu, Xiaochuan Feng, Haikun Zhang, Lifeng Jia, Pengcheng Ma, Le Cao, Nianliang Zhang, Tao Zhao

Abstract read
In one paragraph

Article in Journal of thoracic disease, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jinxiang Yu *School of Anesthesiology, Shandong Second Medical University, Weifang, China.
Xiaochuan Feng *Department of Pathology, School of Basic Medical Sciences, Shandong Second Medical University, Weifang, China.
Haikun ZhangSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.
Lifeng JiaSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.
Pengcheng MaSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.
Le CaoSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.
Nianliang ZhangSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.
Tao ZhaoSchool of Anesthesiology, Shandong Second Medical University, Weifang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: In idiopathic pulmonary fibrosis (IPF), damage to alveolar type II (AT2) cells and their aberrant reprogramming are regarded as key events in disease progression. Apart from anesthetic exposure, the peri-anesthetic period is also characterized by additional stressors, such as mechanical ventilation-induced stretch. Here, peri-anesthetic stress-related genes (PSRGs) were treated as a literature-derived, biologically relevant prior gene framework to prioritize candidate genes associated with AT2 state remodeling in IPF. Methods: Single-cell and bulk transcriptomic datasets from IPF and control lungs were analyzed. PSRGs were intersected with concordant differentially expressed genes to identify candidate hub genes, which were further prioritized using an integrated machine-learning framework. Results: Two AT2 states, mature and injury/transitional, were identified. Conclusions:

Indexed as

alveolar type II cells (AT2 cells)Idiopathic pulmonary fibrosis (IPF)IGFBP2peri-anesthetic stress-related genes (PSRGs)

Identifiers

PMID42444906
PMCPMC13358741

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.