Evidence map›Paper›PMID 42450108›Full record

ArticleInternational journal of molecular sciences2026

Genome-Wide Association Mapping and Integrated Transcriptomic-Genomic Analysis Reveal Candidate Genes for Grain Transparency in Rice.

Fuge Cai, Fujun Wang, Shuai Nie, Minhua Zheng, Song Bai, Hui Li, Meilin Tan, Mengquan Chen, Dilin Liu, Wu Yang

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Fuge CaiAnshun Academy of Agricultural Sciences, Anshun 562100, China.
Fujun WangRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Shuai NieRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.ORCID 0000-0002-4832-1271
Minhua ZhengRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Song BaiRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Hui LiAnshun Academy of Agricultural Sciences, Anshun 562100, China.
Meilin TanAnshun Academy of Agricultural Sciences, Anshun 562100, China.
Mengquan ChenAnshun Academy of Agricultural Sciences, Anshun 562100, China.
Dilin LiuRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.ORCID 0000-0003-2912-6072
Wu YangRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.

Funding

Special Funding for the Construction of the High-Level Academy of Agricultural Sciences NYQS202606
6 · The paper itself

Abstract

Grain transparency (GT) is a key determinant of rice appearance quality and consumer preference, yet its genetic basis remains poorly understood. In this study, we evaluated GT in a panel of 450 rice accessions grown in two environments (Guangzhou and Yangjiang). Nineteen quantitative trait loci (QTL) for GT were identified by a genome-wide association study (GWAS), distributed across all rice chromosomes except chromosomes 2 and 12. Among these, four QTL (

Indexed as

Edible GrainGenome-Wide Association StudyOryzaTranscriptomeChromosome MappingChromosomes, PlantGene Expression ProfilingGene Expression Regulation, PlantHaplotypesLinkage DisequilibriumPhenotypePlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociPlant Proteinscandidate genegenome-wide association studygrain transparencyquantitative trait loci (QTL)rice

Identifiers

PMID42450108
PMCPMC13361321

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.