Evidence map›Paper›PMID 42481382›Full record

ArticleGut2026

Deciphering the prodrome of inflammatory bowel disease up to 10 years before disease onset by massively parallel serology.

Arno R Bourgonje, Gabriel Innocenti, Alexandra E Livanos, Melanie Prinzensteiner, Jared S Magee, Mark S Riddle, Renee M Laird, Thierry Dervieux, Chad K Porter, Sacha Gnjatic and 6 more

Abstract read
In one paragraph

Article in Gut, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Arno R BourgonjeDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine, New York, New York, USA.ORCID http://orcid.org/0000-0001-5754-3821
Gabriel InnocentiCenter for Cancer Research, Medical University of Vienna, Vienna, Austria.
Alexandra E LivanosDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine, New York, New York, USA.ORCID http://orcid.org/0000-0002-8418-3400
Melanie PrinzensteinerCenter for Cancer Research, Medical University of Vienna, Vienna, Austria.
Jared S MageeGastroenterology, Walter Reed National Military Medical Center, Bethesda, Maryland, USA.
Mark S RiddlePfizer Inc, New York, New York, USA.
Renee M LairdDepartment of Diarrheal Disease Research, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.
Thierry DervieuxPrometheus Laboratories, Prometheus Biosciences Inc, San Diego, California, USA.
Chad K PorterTranslational and Clinical Research Department, Naval Medical Research Command, Silver Spring, Maryland, USA.
Sacha GnjaticPrecision Immunology Institute, Icahn School of Medicine, New York, New York, USA.
Francesca PetraliaDepartment of Genetics and Genomics Sciences, Icahn School of Medicine, New York, New York, USA.
Joana TorresDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine, New York, New York, USA.ORCID http://orcid.org/0000-0003-2895-5821
Mayte Suárez-FariñasDepartment of Genetics and Genomics Sciences, Icahn School of Medicine, New York, New York, USA.
Thomas VoglCenter for Cancer Research, Medical University of Vienna, Vienna, Austria saurabh.mehandru@mssm.edu Jean-frederic.colombel@mssm.edu thomas.vogl@meduniwien.ac.at.ORCID http://orcid.org/0000-0002-3892-1740
Jean-Frederic ColombelDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine, New York, New York, USA saurabh.mehandru@mssm.edu Jean-frederic.colombel@mssm.edu thomas.vogl@meduniwien.ac.at.ORCID http://orcid.org/0000-0001-6472-249X
Saurabh MehandruDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine, New York, New York, USA saurabh.mehandru@mssm.edu Jean-frederic.colombel@mssm.edu thomas.vogl@meduniwien.ac.at.

Funding

Determination of mucosal immune responses to, and infection of the gastrointestinal tract by Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2)R01DK123749 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CERUTTI, ANDREA, FAITH, JEREMIAH JAMES · 2020 to 2024
$4.9M
The role of microbiota specific T cells in Inflammatory Bowel DiseaseR01DK146930 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Jeremiah James Faith, Dan Littman · 2026 to 2026
$726k
NIDDK NIH HHS R01 DK123749NIDDK NIH HHS R01 DK146930
6 · The paper itself

Abstract

backgroundDefining immune dysregulation during the asymptomatic prodrome of immune-mediated diseases offers opportunities for early disease detection and interception. In inflammatory bowel disease (IBD), prodromal immune changes remain poorly characterised.

objectiveTo define preclinical immunological alterations by characterising longitudinal serum antibody repertoires using high-throughput phage-display immunoprecipitation sequencing (PhIP-Seq).

designWe applied PhIP-Seq to profile antibody responses in 2000 longitudinal serum samples from 200 individuals who developed Crohn's disease (CD), 200 who developed ulcerative colitis (UC) and 100 matched healthy controls within the US military Proteomic Evaluation and Discovery in an IBD Cohort of Tri-service Subjects cohort, collected up to 10 years before diagnosis. Antibody repertoires were profiled against 357 000 microbial-associated, viral-associated, food-associated and immune-associated peptides.

resultsAntibody repertoire variability was increased up to ~4 years prediagnosis in pre-CD and pre-UC individuals. Differential analyses revealed elevated herpesvirus-directed responses (notably Epstein-Barr virus) and anti-flagellin antibodies up to 10 years prediagnosis in CD, particularly in individuals who later developed complicated or ileal disease. In contrast, responses to encapsulated bacteria (eg,

conclusionsLarge-scale serological profiling of archived prediagnostic samples identified disease-specific immune trajectories years before IBD onset, providing novel insights into disease pathogenesis in its prodromal phase.

Indexed as

ANTIGENSBIOMARKERSINFLAMMATORY BOWEL DISEASE

Identifiers

PMID42481382
PMCPMC13626156

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.