Evidence mapPaperPMID 42501130Full record

ArticleBiogerontology2026

Transcriptomic landscape of human cardiac aging: identification of cardioselective age-associated genes and predictive modeling.

Sheena Yi-Hsin Cheng, Yi-Chiung Hsu

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Article in Biogerontology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Sheena Yi-Hsin ChengBiochemistry Program, University of Southern California, Los Angeles, CA, 90089, USA.
Yi-Chiung HsuDepartment of Biomedical Sciences and Engineering, National Central University, No. 300, Zhongda Road, Taoyuan, 320317, Taiwan. syicncu@g.ncu.edu.tw.ORCID http://orcid.org/0000-0002-8712-8714

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age is a major risk factor for cardiovascular disease, yet the molecular mechanisms underlying human cardiac aging are not fully understood. Using bulk RNA sequencing data from the Genotype-Tissue Expression (GTEx) project, we identified cardiac age-associated genes by intersecting transcripts significantly correlated with age in both the atrial appendage and left ventricle, while excluding those similarly altered in skeletal muscle. Among these, 131 genes were positively correlated with age, and 262 were negatively correlated. Functional enrichment and gene set enrichment analyses revealed several recurring biological themes. Pathways positively enriched with age included the P53 pathway, replicative senescence, extracellular matrix organization, transient receptor potential channel activity, and cardiac epithelial-mesenchymal transition. Conversely, negatively enriched pathways involved fatty acid oxidation, oxidative phosphorylation, mitochondrial biogenesis, membrane repolarization, cardiac conduction, and NOS1 signaling. Immune deconvolution indicated an age-dependent increase in neutrophil fractions and a decrease in monocyte abundance. Finally, an ordinal elastic net regression model, trained on these cardiac age-associated genes, demonstrated acceptable internal performance, achieving a quadratic weighted kappa of 0.797 and an ordinal concordance index of 0.901. External validation on two independent microarray cohorts showed modest predictive capability, with R

Indexed as

AgingHeartMyocardiumTranscriptomeAgedFemaleGene Expression ProfilingHumansMaleMiddle AgedAgingGene expressionGTExHeartRegularized ordinal regression

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.