Evidence map›Paper›PMID 42523288›Full record

ArticlebioRxiv : the preprint server for biology2026

Structural elements required for the efficient loading and activation of HELB on RPA-coated single-stranded DNA.

Oliver J Wilkinson, Silvia Hormeño, Clara Aicart-Ramos, Ayush Mistry, Edwin Antony, Fernando Moreno-Herrero, Mark S Dillingham

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Oliver J WilkinsonDNA:Protein Interactions Unit, School of Biochemistry and Biomedical Sciences, University of Bristol, BS8 1TD, UK.ORCID 0000-0003-4107-6434
Silvia HormeñoDepartment of Macromolecular Structures, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas, 28049, Spain.ORCID 0000-0001-6549-357X
Clara Aicart-RamosDepartment of Macromolecular Structures, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas, 28049, Spain.ORCID 0000-0002-1114-4259
Ayush MistryDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, MO 63104, USA.ORCID 0000-0003-4755-6893
Edwin AntonyDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, MO 63104, USA.ORCID 0000-0002-1888-054X
Fernando Moreno-HerreroDNA:Protein Interactions Unit, School of Biochemistry and Biomedical Sciences, University of Bristol, BS8 1TD, UK.ORCID 0000-0003-4083-1709
Mark S DillinghamDepartment of Macromolecular Structures, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas, 28049, Spain.ORCID 0000-0002-4612-7141

Funding

Coordination of DNA Metabolism by Replication Protein AR35GM149320 · NIGMS · SAINT LOUIS UNIVERSITY · PI Edwin Antony · 2023 to 2026
$2.3M
Pre-synaptic events in homologous recombination and maintenance of genomic stabilityR01CA305375 · NCI · SAINT LOUIS UNIVERSITY · PI Edwin Antony · 2025 to 2026
$1.0M
NCI NIH HHS R01 CA305375NIGMS NIH HHS R35 GM149320
6 · The paper itself

Abstract

HELB is a human helicase involved in DNA repair and replication that interacts physically with the single-stranded DNA binding protein RPA. ATP-dependent translocation of HELB along ssDNA results in the active displacement of RPA molecules and the formation of ssDNA loops, suggesting that HELB contains at least two DNA binding sites. In this work, we investigated the role of HELB-specific structural elements in facilitating interactions between HELB and RPA-coated DNA. We show that a predicted OB-fold in the N-terminal region of the protein is important both for loop extrusion and RPA displacement. We confirm that a HELB-specific-motif within the RecA-like helicase/translocase domains is critical for binding RPA in solution but that, once HELB is bound to ssDNA, is dispensable for RPA displacement. We propose a model for RPA displacement in which both structural elements play important roles in the recruitment and activation of HELB at RPA-ssDNA filaments.

Indexed as

BiochemistryBiological SciencesDNA helicasereplication protein Areproductive ageingRPA displacementsingle-molecule biophysics

Identifiers

PMID42523288
PMCPMC13404968

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.