Evidence mapPaperPMID 42534147Full record

ArticleBiomedical reports2026

Bacterial metagenomic analysis of patients with chronic kidney disease undergoing hemodialysis based on 16S rDNA amplicon sequencing.

Baramett Somtha, Suthida Visedthorn, Thunvarat Saejew, Preeyarat Pavatung, Wannasit Wathanavasin, Talerngsak Kanjanabuch, Sunchai Payungporn

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Article in Biomedical reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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2 · The registry

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5 · Who and what money

Authors and funding

7 authors.

Baramett SomthaMedical Science Program, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.
Suthida VisedthornDepartment of Biochemistry, Center of Excellence in Systems Microbiology, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.
Thunvarat SaejewDepartment of Internal Medicine, Center of Excellence in Kidney Metabolic Disorders, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.
Preeyarat PavatungDepartment of Internal Medicine, Center of Excellence in Kidney Metabolic Disorders, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.
Wannasit WathanavasinDepartment of Medicine, Nephrology Unit, Charoenkrung Pracharak Hospital, Bangkok 10120, Thailand.
Talerngsak KanjanabuchDepartment of Internal Medicine, Center of Excellence in Kidney Metabolic Disorders, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.
Sunchai PayungpornDepartment of Biochemistry, Center of Excellence in Systems Microbiology, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chronic kidney disease (CKD) is a medical condition affecting >800 million patients globally, with end-stage kidney disease representing the most severe stage, usually requiring dialysis as a form of renal replacement therapy. As these patients have an increased risk of sepsis-associated mortality, and due to the limitations that arise from the use of traditional methods, prompt and accurate approaches in pathogen identification are required to ensure appropriate clinical management. The present study aimed to identify and analyze the bacterial profile of hemodialysis (HD) catheters obtained from patients with CKD who were undergoing hemodialysis using 16S ribosomal DNA (rDNA) amplicon sequencing. The present study proposed the use of the metagenomic approach in clinical laboratory settings. The results obtained in the present study revealed that the bacterial profile between site A (from the patient to the dialysis machine) and site V (from the machine back into the patient) had notable differences, with α- and β-diversity indices suggesting an increased diversity at site V. In addition, analyses of the relative abundance and linear discriminant analysis effect size revealed the presence of known pathogens, including

Indexed as

bacteriachronic kidney diseasehemodialysismetagenomicsnanopore sequencing

Identifiers

PMID42534147
PMCPMC13419879

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