Evidence map›Paper›PMID 42537375›Full record

ArticlePoultry science2026

Comparative analysis of gut virome signatures between ducks raised in aquatic and dryland environments.

Fei Wang, Hongbo Zeng, Mingyue Fei, Xuezhen Guo, Jie Cai, Hua Yang, Yingping Xiao

Abstract read
In one paragraph

Article in Poultry science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fei WangState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Hongbo ZengState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Mingyue FeiState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Xuezhen GuoState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Jie CaiCollege of Animal Sciences, Zhejiang University, Hangzhou, 310058, China.
Hua YangState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China. Electronic address: yanghua@zaas.ac.cn.
Yingping XiaoState Key Laboratory for Quality and Safety of Agro-Products, Institute of Agro-Product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China. Electronic address: xiaoyp@zaas.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study comprehensively compared the viral community structure, functional potential, and virulence factors in ducks reared under WOW (without water) and WW (with water) conditions. Alpha diversity analysis indicated that the WW group exhibited significantly higher Shannon and Simpson indices compared with the WOW group (P < 0.01), though viral richness did not differ significantly between groups (P > 0.05). Beta diversity analyses (PCoA, and NMDS) revealed distinct separations between the viral communities of the two groups, highlighting the impact of rearing systems on viral composition. LEfSe analysis identified 35 viral families as biomarkers, with Crevaviridae, Drexlerviridae, and Demerecviridae enriched in the WOW group, while Straboviridae, Herelleviridae, and Mimiviridae were predominant in the WW group. Taxonomic composition analysis demonstrated that the WW group had significantly reduced abundances of Uroviricota and Spinunavirus but increased abundances of Nucleocytoviricota and Eurybiavirus (P < 0.05). Functional annotation revealed that viral genes in the WW group were enriched in core viral processes (e.g., virion assembly, DNA replication) and metabolic pathways (e.g., nucleotide metabolism, carbohydrate metabolism). Additionally, the WW group showed altered profiles of CAZymes and virulence factors, with increased antimicrobial resistance and biofilm formation capabilities. These findings demonstrate that water exposure reshapes the duck gut virome by enhancing viral diversity, altering taxonomic structure, and activating functional pathways associated with pathogenicity and nutrient metabolism. This study provides critical insights into the ecological impact of rearing systems on viral communities and offers a foundation for optimizing duck farming practices to mitigate health risks.

Indexed as

DuckFunctional annotationGut viromeRearing conditionVirulence factors

Identifiers

PMID42537375
PMCPMC13452205

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.