Evidence map›Paper›PMID 42578693›Full record

ArticlemSystems2026

Integrated multi-omics analysis identifies microbial and metabolic signatures and drivers of CNS autoimmunity.

Theresa L Montgomery, Emily A Nelson, Lauren A Downs, Eamonn R Heney, Margaret Frances J Lee, Cameron Martino, Daniel McDonald, Gibraan Rahman, Rob Knight, Dimitry N Krementsov

Abstract read
In one paragraph

Article in mSystems, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Theresa L MontgomeryDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.ORCID 0000-0002-0950-9618
Emily A NelsonDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.
Lauren A DownsDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.
Eamonn R HeneyDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.
Margaret Frances J LeeDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.
Cameron MartinoLeaven Foods Inc., San Diego, California, USA.
Daniel McDonaldDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.
Gibraan RahmanDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.
Rob KnightDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.ORCID 0000-0002-0975-9019
Dimitry N KrementsovDepartment of Biomedical and Health Sciences, University of Vermont, Burlington, Vermont, USA.ORCID 0000-0003-2709-7466

Funding

Vermont Immunology/Infectious Diseases CenterP30GM118228 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BUDD, RALPH C · 2016 to 2021
$6.8M
Vermont Immunology/Infectious Diseases Training GrantT32AI055402 · NIAID · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI GARY E WARD · 2005 to 2026
$2.7M
Interactions Between Host Genetics and the Gut Microbiome in CNS AutoimmunityR01NS097596 · NINDS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI KREMENTSOV, DIMITRY N · 2017 to 2021
$1.7M
Acquisition of a new Flow CytometerS10OD026843 · OD · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BOYSON, JONATHAN E · 2019 to 2019
$204k
Mechanisms Underlying Regulation of Susceptibility to CNS Autoimmunity by Commensal Lactobacillus SpeciesF31NS120381 · NINDS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI MONTGOMERY, THERESA LYNN · 2021 to 2022
$30k
National Multiple Sclerosis Society RG-2407-43682NIAID NIH HHS T32 AI055402NIGMS NIH HHS P30 GM118228NIH HHS S10 OD026843NINDS NIH HHS F31 NS120381NINDS NIH HHS F31NS120381-01A1NINDS NIH HHS R01 NS097596
6 · The paper itself

Abstract

Multiple sclerosis (MS) is an autoimmune disease of the central nervous system (CNS), driven by genetic and environmental determinants. The gut microbiome of people with MS (pwMS) is distinct and influences disease through immunomodulatory metabolite production. Circulating metabolites are altered in pwMS, but identifying microbial-metabolic drivers remains challenging. We previously showed that colonization by the gut commensal

Indexed as

AutoimmunityCentral Nervous SystemEncephalomyelitis, Autoimmune, ExperimentalGastrointestinal MicrobiomeMetabolomeMultiple SclerosisAnimalsDietFemaleLimosilactobacillus reuteriMetabolomicsMiceMice, Inbred C57BLMultiomicsTryptophanTryptophancresolindoleLimosilactobacillus. reuterimetabolomicsmicrobiomemulti-omicsmultiple sclerosis

Identifiers

PMID42578693
PMCPMC13595924

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.