Evidence map›Paper›PMID 42580951›Full record

ArticleUltrasound in medicine & biology2026

Accelerating Focused Ultrasound Modeling in Heterogeneous Spinal Cord Anatomy With Vision Transformer Operator Networks.

Avisha Kumar, Xuzhe Zhi, A Daniel Davidar, Max J Kerensky, Nicholas Theodore, Amir Manbachi

Abstract read
In one paragraph

Article in Ultrasound in medicine & biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Avisha KumarDepartment of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, MD, USA.
Xuzhe ZhiDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
A Daniel DavidarDepartment of Neurosurgery, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Max J KerenskyDepartment of Biomedical Engineering, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Nicholas TheodoreDepartment of Neurosurgery, Johns Hopkins School of Medicine, Baltimore, MD, USA; Department of Biomedical Engineering, Johns Hopkins School of Medicine, Baltimore, MD, USA.
Amir ManbachiDepartment of Electrical and Computer Engineering, Johns Hopkins University, Baltimore, MD, USA; Department of Neurosurgery, Johns Hopkins School of Medicine, Baltimore, MD, USA; Department of Biomedical Engineering, Johns Hopkins School of Medicine, Baltimore, MD, USA; Department of Mechanical Engineering, Johns Hopkins University, Baltimore, MD, USA; Department of Anesthesiology and Critical Care Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA. Electronic address: amir.manbachi@jhu.edu.

Funding

Medical Scientist Training ProgramT32GM136577 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ANDREA L COX · 2020 to 2026
$13.4M
NIGMS NIH HHS T32 GM136577
6 · The paper itself

Abstract

objectiveThe purpose of this work is to develop a data-driven framework for real-time prediction of focused ultrasound pressure fields in the spinal cord, addressing the limitations of computationally intensive acoustic simulations. Focused ultrasound therapy offers submillimeter precision for targeted treatment of spinal cord injuries, but its efficacy depends critically on transducer placement due to the spinal cord's complex geometry and acoustic heterogeneity across anatomical layers.

methodsConventional computational models rely on wave propagation simulations to generate patient-specific pressure maps, but these can take hours to complete parameter sweeps and are impractical for surgical decision-making. To address this bottleneck, we introduce a vision transformer-based Deep Operator Network (ViT-DeepONet), benchmarked against a convolutional DeepONet (convolutional neural network [CNN]-DeepONet) and a geometry-aware Fourier Neural Operator. By learning the solution operator of the governing partial differential equations, these models generalize across transducer positions and spinal geometries without new simulations.

resultsTrained on 8000 simulated pressure maps from porcine spinal cords (n=25), ViT-DeepONet achieves realtime predictions with 3.1% test loss and generalizes to human ultrasound images with 4.4% loss, reducing computation time by more than 91,000-fold relative to central processing unit-based high-fidelity solvers. ViT-DeepONet outperforms CNN-DeepONet (5.1% loss) while using fivefold fewer parameters. A geometry-aware Fourier Neural Operator attains the lowest loss (2.6%), but with eightfold higher complexity.

conclusionViT-DeepONet accurately captures spatial and geometric dependencies in heterogeneous acoustic domains, enabling real-time ultrasound pressure prediction with a lower computational burden. These results demonstrate the feasibility of operator learning as a powerful framework for accelerating acoustic modeling and optimizing patient-specific therapeutic ultrasound imaging.

Indexed as

Neural Networks, ComputerSpinal CordSpinal Cord InjuriesAnimalsComputer SimulationConvolutional Neural NetworksSwineDeep learningFocused ultrasoundNeural operatorsOperator learningSpinal cord injuryVision transformer

Identifiers

PMID42580951
PMCPMC13463386

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.