Evidence map›Paper›PMID 42583813›Full record

ArticleProtein science : a publication of the Protein Society2026

Peroxynitrite-induced structural remodeling and aggregation of hemoglobin under nitroxidative stress.

Shaik Basha, Aradhika Vijeev, Darshan Chikkanayakanahalli Mukunda, Krishna Kishore Mahato

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shaik BashaDepartment of Biophysics, Manipal School of Life Sciences, Manipal Academy of Higher Education, Manipal, India.
Aradhika VijeevDepartment of Biophysics, Manipal School of Life Sciences, Manipal Academy of Higher Education, Manipal, India.
Darshan Chikkanayakanahalli MukundaDepartment of Biophysics, Manipal School of Life Sciences, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0002-2368-5458
Krishna Kishore MahatoDepartment of Biophysics, Manipal School of Life Sciences, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0001-9873-3445

Funding

Department of Biotechnology - Boost to University Interdisciplinary Life science Departments for Education and Research (DBT-BUILDER) BT/INF/22/SP43065/2021Department of Science and Technology -"Innovation in Science Pursuit for Inspired Research (DST-INSPIRE) IF:220005Indian Council of Medical Research (ICMR) Ref. 17x(3)/Adhoc/33/2022-ITRIndian Council of Medical Research (ICMR) Ref. EM/Dev/SG/75/0782/2023
6 · The paper itself

Abstract

Peroxynitrite (PN), generated by the reaction of nitric oxide with superoxide, is a potent reactive nitrogen species (RNS) implicated in nitroxidative protein damage in cardiovascular and neurodegenerative diseases. Hemoglobin (Hb), the principal oxygen-transport protein of erythrocytes, is a key intravascular scavenger and target of PN; however, how controlled PN exposure translates into structural remodeling and aggregation of Hb remains poorly understood. Purified human Hb was exposed to PN across sub-stoichiometric to moderate oxidant excess and characterized using intrinsic fluorescence, UV-visible (UV-vis) spectroscopy, 2,4-dinitrophenylhydrazine (DNPH) carbonyl assay, Thioflavin T (ThT), 8-anilino-1-naphthalenesulfonic acid (ANS), Congo Red (CR), Fourier-transform infrared (FTIR) spectroscopy with Amide I deconvolution, dynamic light scattering (DLS) with zeta potential, x-ray powder diffraction (XRPD), scanning electron microscopy (SEM), atomic force microscopy (AFM), and fluorescence microscopy. At low oxidant loads, PN caused concentration-dependent fluorescence quenching, carbonyl accumulation, and graded UV-visible absorbance increases, consistent with heme-centered oxidation and limited aromatic residue modification. At higher concentrations, Amide I deconvolution revealed collapse of α-helical content from 66.41% to 8.81% and β-sheet enrichment to 71.18%, accompanied by surface charge neutralization, increased hydrodynamic diameter, and enhanced nanoscale roughness. Despite β-sheet accumulation and ThT/CR-positive aggregate formation, XRPD, AFM, SEM, and fluorescence microscopy showed no long-range crystalline order or fibrillar morphology, demonstrating that PN drives Hb toward amorphous and oligomeric assemblies rather than canonical amyloid fibrils. Time-dependent assays at 37°C confirmed that PN modification lowers the nucleation barrier for thermally driven aggregation. These findings define physicochemical thresholds separating protective scavenging from structural destabilization and offer a framework for distinguishing nitroxidative protein aggregation from classical amyloid fibrillation.

Indexed as

HemoglobinsPeroxynitrous AcidProtein AggregatesHumansNitrosative StressOxidative StressHemoglobinsPeroxynitrous AcidProtein Aggregatesamyloidhemoglobinnitroxidative stressperoxynitriteprotein aggregation

Identifiers

PMID42583813
PMCPMC13463319

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.