Evidence map›Paper›PMID 42599157›Full record

ArticleeLife2026

Cryo-EM structure of the bicarbonate receptor GPR30.

Shota Kaneda, Airi Jo-Watanabe, Hiroaki Akasaka, Hidetaka S Oshima, Takehiko Yokomizo, Wataru Shihoya, Osamu Nureki

Abstract read
In one paragraph

Article in eLife, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shota KanedaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0009-0001-1433-9350
Airi Jo-WatanabeDepartment of Ion Signaling and Response, The Sakaguchi Laboratory, Keio University School of Medicine, Tokyo, Japan.ORCID https://orcid.org/0000-0003-0899-9915
Hiroaki AkasakaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Hidetaka S OshimaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Takehiko YokomizoDepartment of Biochemistry, Juntendo University Graduate School of Medicine, Tokyo, Japan.ORCID https://orcid.org/0000-0002-5219-1553
Wataru ShihoyaDepartment of Signal Exploration, The Sakaguchi Laboratory, Keio University School of Medicine, Tokyo, Japan.ORCID https://orcid.org/0000-0003-4813-5740
Osamu NurekiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0003-1813-7008

Funding

Japan Agency for Medical Research and Development 25ak0101252h0001Japan Agency for Medical Research and Development JP20gm6210026Japan Agency for the Medical Research and Development JP233fa627001Japan Society for the Promotion of Science 21H05037Japan Society for the Promotion of Science 23K06393Japan Society for the Promotion of Science 24KJ0906Japan Society for the Promotion of Science 24KK0146Japan Society for the Promotion of Science 25H01336Japan Society for the Promotion of Science 25K02397JST FOREST Program 10.52926/jpmjfr220sThe Platform Project for Supporting Drug Discovery and Life Science Research (Basis for Supporting Innovative Drug Discovery and Life Science Research (BINDS)) JP23ma1210012The Platform Project for Supporting Drug Discovery and Life Science Research (Basis for Supporting Innovative Drug Discovery and Life Science Research (BINDS)) JP23ma121002
6 · The paper itself

Abstract

G-protein-coupled receptor 30 (GPR30) is a bicarbonate receptor that plays a vital role in cellular responses to extracellular pH and ion homeostasis. Despite its significance, the mechanisms by which GPR30 interacts with bicarbonate ions remain elusive. There is no consensus on a drug that targets GPR30, and difficulties in pharmacological analyses have limited biological and drug discovery research on GPR30. Here, we present the cryo-electron microscopy structure of human GPR30 in the presence of bicarbonate ions at 3.15 Å resolution. Our structure reveals unique extracellular pockets and critical residues for bicarbonate binding and activation. Functional assays demonstrate that mutations in these residues impair bicarbonate-induced GPR30 activation, underscoring their importance in receptor function. This study also provides insights into G-protein coupling, highlighting the structural divergence between GPR30 and other G-protein-coupled receptors (GPCRs). Our findings not only advance the understanding of the role of GPR30 in pH homeostasis but also pave the way for the development of high-affinity drugs targeting GPR30 for therapeutic interventions in diseases associated with acid-base imbalance.

Indexed as

BicarbonatesReceptors, G-Protein-CoupledCryoelectron MicroscopyHumansModels, MolecularProtein BindingProtein ConformationBicarbonatesReceptors, G-Protein-Coupledbicarbonate-sensingcryo-EMGPCRhumanmolecular biophysicsstructural biology

Identifiers

PMID42599157
PMCPMC13476069

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.