Evidence map›Paper›PMID 42638932›Full record

ArticleHuman mutation2026

Zhi Liu, Gang Li, Ling Lin

Abstract read
In one paragraph

Article in Human mutation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Human mutation · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Zhi LiuState Key Laboratory of Advanced Medical Materials and Medical Devices, Tianjin University, Tianjin, China, tju.edu.cn.ORCID https://orcid.org/0000-0003-2091-1592
Gang LiState Key Laboratory of Advanced Medical Materials and Medical Devices, Tianjin University, Tianjin, China, tju.edu.cn.ORCID https://orcid.org/0000-0002-8573-1608
Ling LinState Key Laboratory of Advanced Medical Materials and Medical Devices, Tianjin University, Tianjin, China, tju.edu.cn.ORCID https://orcid.org/0000-0003-2022-3220

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Posttranslational modification (PTM) plays an important role in protein regulation and may influence tumor initiation and progression. However, the role of PTM-related programs in lung adenocarcinoma (LUAD) remains incompletely understood. Materials and Methods: Single-cell RNA sequencing (scRNA-seq) data were analyzed to quantify the activity of PTM-related gene set using the AUCell algorithm and to characterize intercellular communication using CellChat. Molecular subtypes and differentially expressed genes (DEGs) were identified using ConsensusClusterPlus and limma packages, respectively, followed by functional enrichment analysis. Univariate Cox regression, LASSO regression with 10-fold cross-validation, and stepwise multivariable Cox regression based on the Akaike information criterion (AIC) were used to construct a prognostic model. Immune infiltration was evaluated using ESTIMATE, CIBERSORT, MCP-counter, and TIMER algorithms, and drug sensitivity was predicted using oncoPredict package. The IMvigor210 cohort was used for exploratory assessment of immunotherapy response. Quantitative real-time reverse transcription PCR (qRT-PCR) was used to measure the expressions of the model genes. CCK-8, wound-healing, and Transwell assays were performed to evaluate the effects of Results: Comparison between two PTM groups revealed that receptor ligands such as MIF-(CD74+CXCR4) and MIF-(CD74+CD44) had higher communication probabilities in the high-PTM-score group. Two molecular subtypes were identified, and a six-gene risk model for LUAD was established based on Conclusion: The PTM-related six-gene model showed potential for prognostic stratification and characterization of immune-related features in LUAD. However, further prospective and experimental validation is required before direct clinical application.

Indexed as

Adenocarcinoma of LungBiomarkers, TumorLung NeoplasmsProtein Processing, Post-TranslationalCell Line, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticHumansIntercellular Signaling Peptides and ProteinsPrognosisBiomarkers, TumorIntercellular Signaling Peptides and Proteinsimmune infiltrationlung adenocarcinomamachine learningposttranslational modificationsingle-cell RNA sequencing

Identifiers

PMID42638932
PMCPMC13501256

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.