Evidence map›Paper›PMID 42653409›Full record

ReviewInternational journal of molecular sciences2026

Light-Root Microbiome Interactions in Vegetable Crops: From Photoreceptor Signaling to Exudate-Mediated Recruitment.

Lidiia Samarina, Arysgul Turbekova, Serik Jantassov, Halil Demir, Farida Kozhakhmetova, Almagul Begalina, Renata Akzhunis, Khaiyrnisa Aisakulova

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lidiia SamarinaSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.ORCID 0000-0002-0500-1198
Arysgul TurbekovaSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.
Serik JantassovKazakh Research Institute of Fruit and Vegetable Growing LLP, 050060 Almaty, Kazakhstan.ORCID 0000-0002-3155-0676
Halil DemirDepartment of Horticulture, Faculty of Agriculture, University of Akdeniz, 07058 Antalya, Turkey.ORCID 0000-0003-2237-5439
Farida KozhakhmetovaSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.
Almagul BegalinaSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.
Renata AkzhunisSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.
Khaiyrnisa AisakulovaSaken Seifullin Kazakh Agrotechnical University, 010000 Astana, Kazakhstan.

Funding

Ministry of Science and Higher Education of the Republic of Kazakhstan AP23488411
6 · The paper itself

Abstract

In protected cultivation, light intensity, spectral quality, red/far-red ratio, photoperiod and diel fluctuation can alter the belowground biological environment by modifying carbon allocation, root architecture, root exudation, nutrient acquisition, immune tone and rhizosphere physicochemistry. Direct community-level evidence in vegetables remains sparse, but targeted experiments on bacterial colonization, arbuscular mycorrhizal symbiosis, beneficial fungi and root pathogens show that light can condition specific plant-microbe interactions. This review develops a molecular framework for light-root-microbiome interactions in protected vegetable crops and distinguishes direct community evidence, targeted colonization or symbiosis evidence, crop-specific indirect evidence and mechanistic analogues. We synthesize how photoreceptors and PIF-, HY5-, hormone- and immunity-related pathways regulate root niche construction, while also considering direct microbial photoreception. Experimental examples include tomato rhizosphere responses to shading, R:FR-dependent colonization by

Indexed as

Crops, AgriculturalLightMicrobiotaPlant RootsVegetablesRhizosphereSignal TransductionSymbiosisdisease suppressionLED lightinglight intensityprotected cultivationred/far-red ratiorhizosphereroot exudatesroot microbiomesynthetic microbial communitiesvegetable crops

Identifiers

PMID42653409
PMCPMC13513237

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.