Evidence map›Paper›PMID 42658459›Full record

ArticleOdontology2026

An exploratory comparative analysis of MicroRNA networks in external cervical resorption, periodontal ligament, and periapical lesions: an ex vivo laboratory investigation.

Lisa Isaac, Zeliha Uğur Aydın, Guoxian Wei, Muhammed Erkan Karabekmez, Tun-Yi Hsu, Xiaofei Zhu, Sami Chogle

Abstract read
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In one paragraph

Article in Odontology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lisa Isaac *Department of Endodontics, Boston University Henry M. Goldman School of Dental Medicine, 635 Albany Street, Boston, MA, USA.
Zeliha Uğur Aydın *Department of Endodontics, Boston University Henry M. Goldman School of Dental Medicine, 635 Albany Street, Boston, MA, USA. zuaydin@bu.edu.ORCID http://orcid.org/0000-0002-1773-9114
Guoxian WeiDepartment of Translational Dental Medicine, Boston University Henry M. Goldman School of Dental Medicine, Boston, MA, USA.
Muhammed Erkan KarabekmezDepartment of Bioengineering, Faculty of Engineering and Natural Sciences, Istanbul Medeniyet University, Istanbul, Turkey.
Tun-Yi HsuDepartment of Endodontics, Boston University Henry M. Goldman School of Dental Medicine, 635 Albany Street, Boston, MA, USA.
Xiaofei ZhuDepartment of Endodontics, Boston University Henry M. Goldman School of Dental Medicine, 635 Albany Street, Boston, MA, USA.
Sami ChogleDepartment of Endodontics, Boston University Henry M. Goldman School of Dental Medicine, 635 Albany Street, Boston, MA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To determine whether external cervical resorption (ECR)a demonstrates a unique microRNA (miRNA) expression profile compared with healthy periodontal ligament (PDL) and periapical lesion (PA). Tissue samples from ECR, PDL, and PA were obtained from systemically healthy donors aged 18-70 years. Total RNA, including small RNAs, was isolated using a silica-membrane-based purification system with on-column DNase digestion. RNA quality was assessed by spectrophotometry (NanoDrop) and microfluidics electrophoresis (Agilent 2100 Bioanalyzer). Samples were hybridized to Affymetrix GeneChip miRNA 4.0 arrays, and data processed with RMA normalization and DABG filtering. Principal component analysis (PCA) was used for clustering. Differential expressions were analyzed by moderated ANOVA with FDR adjustment, and enrichment analysis identified tissue-specific miRNA networks. PCA analysis explained approximately 22% of the total variance, demonstrating that PA clustered separately from PDL and ECR, while ECR samples occupied an intermediate position between the two groups. Differential expression analysis identified 63 miRNAs between ECR and PA and 322 miRNAs between PA and PDL (p< 0.05). Among the ECR and PA comparison, 60 miRNAs were downregulated and three (miR-200c-3p, miR-205-5p, and miR-579-3p) were upregulated in ECR. No significant differences were detected in the ECR- PDL comparison (p> 0.05). Functional enrichment of PA-related miRNAs indicated pathways linked to proliferation, cytoskeletal remodeling, and inflammation, with MTX3, RSBN1L, and STMN3 as predicted targets. This study presents the first comparative analysis of miRNA expressions among ECR, PDL, and PA. PA exhibited distinct differences, whereas ECR and PDL showed similar molecular profiles.

Indexed as

External cervical resorptionMicroRNAs gene expression profilingPeriapical diseasesPeriodontal ligament

Identifiers

What Socratic holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.