Evidence map›Paper›PMID 42685137›Full record

ArticlePLoS computational biology2026

A unified model of short- and long-term plasticity: Effects on network connectivity and information capacity.

Iiro Ahokainen, Marja-Leena Linne

Abstract read
In one paragraph

Article in PLoS computational biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Iiro AhokainenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0002-0865-5947
Marja-Leena LinneFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0003-2577-7329

Funding

Finland’s Ministry of Education and Culture’s Doctoral Education PilotThe Finnish Doctoral Program Network in Artificial Intelligence, AI-DOC
6 · The paper itself

Abstract

Activity-dependent synaptic plasticity is a fundamental learning mechanism that shapes the connectivity and activity of neural circuits. Existing computational models of Spike-Timing-Dependent Plasticity (STDP) capture long-term synaptic changes with varying degrees of biological detail. A common approach is to neglect the influence of short-term dynamics on long-term plasticity, which may be an oversimplification for certain neuron types. Thus, there is a need for new models to investigate how short-term dynamics influence long-term plasticity. To address this gap, we introduce a novel phenomenological model, the Short-Long-Term STDP (SL-STDP) rule, which directly integrates the Tsodyks-Markram model of short-term dynamics with postsynaptic long-term plasticity. We fit the new model to recordings from layer 5 of the visual cortex and study how short-term plasticity affects the firing rate frequency dependence of long-term plasticity in a single synapse. Our analysis revealed that the pre- and postsynaptic frequency dependence of long-term plasticity plays a crucial role in shaping the self-organization of recurrent neural networks (RNNs) and their information processing through the emergence of sink and source nodes. We applied the SL-STDP rule to RNNs and found that neurons in the SL-STDP network self-organize into distinct firing rate clusters, stabilizing the dynamics. We extended the experiments by including homeostatic balancing, namely weight normalization and excitatory-to-inhibitory plasticity, and observed differences in degree correlations between the SL-STDP network and a network without direct coupling between short-term and long-term plasticity. Finally, we evaluated how the modified connectivity affects the networks' information capacity in reservoir computing tasks. The SL-STDP rule outperformed the uncoupled system in the majority of tasks, and including excitatory-to-inhibitory facilitating synapses further improved information capacity. Our study demonstrates that short-term dynamics-induced changes in the frequency dependence of long-term plasticity play a pivotal role in shaping network dynamics and link synaptic mechanisms to information processing in RNNs.

Indexed as

Models, NeurologicalNerve NetNeuronal PlasticityAction PotentialsAnimalsComputational BiologyComputer SimulationHumansNeuronsRecurrent Neural NetworksSynapsesVisual Cortex

Identifiers

PMID42685137
PMCPMC13581215

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.