Evidence map›Paper›PMID 42726847›Full record

ArticleScience advances2026

RNA-independent cis-autoregulatory circuits within bidirectional gene pairs control metabolism.

Xiang-Yu Liu, Yingying Yu, Guo-Xiao Wang, Ruben Garcia-Martin, C Ronald Kahn

Abstract read
In one paragraph

Article in Science advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiang-Yu LiuSection of Integrative Physiology and Metabolism, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-6871-5577
Yingying YuSection of Integrative Physiology and Metabolism, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0001-5357-5527
Guo-Xiao WangSection of Integrative Physiology and Metabolism, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.
Ruben Garcia-MartinSection of Integrative Physiology and Metabolism, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0003-2049-4960
C Ronald KahnSection of Integrative Physiology and Metabolism, Joslin Diabetes Center, and Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-7583-9228

Funding

SPECIAL ASSAY COREP30DK036836 · NIDDK · JOSLIN DIABETES CENTER · PI ROHIT N. KULKARNI · 1986 to 2026
$50.5M
The Insulin Receptor and Its Signaling MechanismsR01DK031036 · NIDDK · JOSLIN DIABETES CENTER · PI C RONALD KAHN · 1986 to 2026
$4.2M
Insulin regulates aging-associated genes through chromatin topologyF99AG088573 · NIA · JOSLIN DIABETES CENTER · PI LIU, XIANGYU · 2024 to 2025
$74k
NIA NIH HHS F99 AG088573NIDDK NIH HHS P30 DK036836NIDDK NIH HHS R01 DK031036
6 · The paper itself

Abstract

Many genes share promoters with another gene on the opposite DNA strand, forming bidirectional pairs. During metabolic transitions, most pairs are coordinately regulated in the liver, in part through chromatin topology. In pairs composed of a long noncoding RNA (lncRNA) and a protein-coding gene (PCG), lncRNA transcription cis-activates PCG transcription by establishing an active chromatin environment at the promoter-proximal enhancer of PCG. Reciprocally, PCG transcription cis-inhibits lncRNA transcription, forming internal cis-autoregulatory circuits. Both directions of regulation are independent of the RNA products but dependent on the transcription process itself. Similar promoter-proximal enhancer signatures and cis-autoregulatory circuits are present in many lncRNA/PCG and PCG/PCG pairs, underscoring the generalizability of these circuits. Using the conserved lncRNA/PCG pair

Indexed as

Gene Expression RegulationGene Regulatory NetworksHomeostasisRNA, Long NoncodingAnimalsChromatinFatty LiverHumansLiverMicePolycomb-Group ProteinsPromoter Regions, GeneticTranscription, GeneticChromatinPolycomb-Group ProteinsRNA, Long Noncoding

Identifiers

PMID42726847
PMCPMC13564825

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.