Evidence map›Paper›PMID 42745000›Full record

ArticleNature genetics2026

Type 1 interferon perturbates clonal competition by reshaping human blood development.

Chhiring Lama, Danielle Isakov, Shira Rosenberg, Miguel Quijada-Álamo, Mirca S Saurty-Seerunghen, Sara Moein, Mathis Nozais, Tsega-Ab Abera, Olivia Sakaguchi, Mansi Totwani and 29 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors.

Chhiring Lama *Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Danielle Isakov *Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Shira RosenbergDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-4760-0746
Miguel Quijada-ÁlamoDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Mirca S Saurty-SeerunghenDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Sara MoeinDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Mathis NozaisDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Tsega-Ab AberaDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Olivia SakaguchiDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Mansi TotwaniDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0009-0006-4912-3388
Grace FreedDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Leila ZaydonDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Chi-Lam PoonDepartment of Physiology, Biophysics & Systems Biology, Weill Cornell Medicine, New York, NY, USA.
Neelang ParghiDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Andrea Kubas-MeyerDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Amy X XieBiochemistry, Structural Biology, Cell Biology, Developmental Biology and Molecular Biology Graduate Programs, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-1441-7849
Mohamed OmarDepartment of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Daniel ChoiDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
Franco Castillo-TokumoriDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-2245-4068
Ghaith Abu-ZeinahDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-1881-3670
Alicia DillardDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Saravanan GanesanDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
Nathaniel D OmansDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
Neville DusajTri-Institutional MD-PhD Program, Weill Cornell Medicine, Rockefeller University, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Paulina ChamelyDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
Eleni MimitouImmunai, New York, NY, USA.ORCID http://orcid.org/0000-0001-9737-6394
Peter Smibert10x Genomics, Pleasanton, CA, USA.
Heidi E KosiorekDepartment of Biostatistics, Mayo Clinic Arizona, Scottsdale, AZ, USA.
Amylou C DueckDepartment of Quantitative Health Sciences and Alliance Statistics and Data Management Center, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0002-9912-1085
Rona WeinbergNew York Blood Center, New York, NY, USA.
Ronan ChaligneComputational Oncology Service, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID http://orcid.org/0000-0003-4332-3291
Bridget MarcellinoMyeloproliferative Neoplasms Research Consortium, New York, NY, USA.
Luigi MarchionniDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-7336-8071
Sanjay PatelDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-7813-4573
Paul SimonsonDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Dan A LandauDivision of Hematology and Medical Oncology, Department of Medicine and Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
Elvin WagenblastDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-0709-2759
Ronald HoffmanNew York Blood Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-6564-6732
Anna S NamDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA. shn9035@med.cornell.edu.ORCID http://orcid.org/0000-0003-4192-8916

Funding

Weill Cornell/Rockefeller/Sloan Kettering MST ProgramT32GM152349 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI KATHARINE C HSU · 2024 to 2026
$6.6M
Elucidating Mechanisms of Therapy-Resistance to Interferon-alfa in Myeloproliferative Neoplasm Stem Cells - Diversity SupplementR01HL167139 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI Ann Mullally, Seung Ha Nam · 2023 to 2026
$2.8M
Deciphering Clonal Hematopoiesis via Single-Cell Multi-omicsF30HL156496 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI DUSAJ, NEVILLE · 2021 to 2024
$205k
U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) F30HL156496U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R01 HL167139U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM152349
6 · The paper itself

Abstract

Inflammation accelerates evolutionary dynamics of hematopoietic stem cells (HSCs) in clonal hematopoiesis and myeloid neoplasms. We studied HSCs, progenitors and immune cells from patients with myeloproliferative neoplasms at baseline and following interferon-α (IFNα) treatment, the only therapy to deplete mutated stem cells. We deployed single-cell multiomics methods that distinguish the IFNα effects on mutated stem cells from the admixed wild-type HSCs, with respect to their differentiation, transcriptomes, immunophenotypes and chromatin accessibility. IFNα simultaneously activated HSCs into two polarized states: a lymphoid progenitor expansion associated with an anti-inflammatory state and an inflammatory myeloid progenitor state derived from HSCs. The augmented lymphoid differentiation balanced the typical myeloproliferative-neoplasm-induced myeloid bias, associated with normalized blood counts. Somatic mutations modified the effects of IFNα on HSC differentiation and cell cycle entry rates. Clonal fitness upon IFNα exposure was due to resistance of CALR- or JAK2-mutated stem cells to differentiate into inflammatory myeloid progenitors.

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.