ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2026
An integrated molecular cytogenetic platform enables precise characterization of Thinopyrum ponticum chromatin and its structural modifications in wheat background.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
key messageBy integrating ND‑FISH, Oligo‑FISH painting, and chromosome microdissection, we established a comprehensive platform for decaploid Thinopyrum ponticum, enabling karyotyping, sequencing, and marker development, which provides precise tools for the targeted introgression and utilization of alien chromatin in wheat breeding. Thinopyrum ponticum (Podp.) Barkworth & D.R. Dewey, a decaploid wild relative of wheat, represents a valuable genetic reservoir for improving abiotic stress tolerance and disease resistance in wheat breeding. However, its complex genome structure and polyploid nature have long impeded both precise genome assembly and comprehensive characterization of individual chromosomes for wheat-Thinopyrum introgressions. In the present study, we established a reference karyotype of individual Th. ponticum chromosomes by integrated cytogenetic methods combining non‑denaturing fluorescence in situ hybridization (ND‑FISH) and bulked oligonucleotide pool‑based FISH (Oligo‑FISH) painting. This platform was subsequently applied to cytogenetically analyze the wheat-Th. ponticum partial amphiploid 'Agrotana'. Immunostaining assays revealed that Thinopyrum chromosomes maintain normal centromeric histone localization and exhibit distinct methylation patterns in the wheat background. The group-6 chromosomes of the Thinopyrum species harbor several superior resistance genes, we performed microdissection and sequencing of Th. ponticum 6J
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