Evidence map›Paper›PMID 42814365›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2027

Enrichment of Arabidopsis Plasma Membrane Proteins by Sequential Differential Centrifugation.

Gijs Wilbrink, Roman Pleskot, Peter Grones

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2027. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Gijs WilbrinkCluster of Plant Developmental Biology, Cell and Developmental Biology, Wageningen University & Research, Wageningen, The Netherlands.
Roman PleskotInstitute of Experimental Botany, Czech Academy of Sciences, Prague, Czech Republic.
Peter GronesCluster of Plant Developmental Biology, Cell and Developmental Biology, Wageningen University & Research, Wageningen, The Netherlands. peter.grones@wur.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plasma membrane (PM) is the primary interface between plant cells and their environment, and its resident proteins mediate key processes such as extracellular signal perception and downstream cellular reprogramming. Yet, PM proteins are typically underrepresented in total protein extracts, and existing enrichment strategies are often laborious and require extensive optimization. Here, a simple and robust workflow is described for enriching PM proteins from Arabidopsis thaliana seedlings using total microsomal membranes obtained by differential centrifugation as starting material. Sequential low- and high-speed spins are used to isolate total microsomal membranes and progressively deplete contaminating organelles, thereby increasing the relative abundance of PM proteins. Coupled with the rich genetic toolkit available in Arabidopsis, this protocol provides an accessible platform for systematic characterization of the PM proteome.

Indexed as

ArabidopsisArabidopsis ProteinsCell FractionationCell MembraneMembrane ProteinsProteomicsCentrifugationMicrosomesProteomeSeedlingsArabidopsis ProteinsMembrane ProteinsProteomeArabidopsisDifferential centrifugationExtractionPlasma membraneProtein enrichment

Identifiers

PMID42814365

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.