Evidence map›Paper›PMID 42816481›Full record

ArticleNature communications2026

Regulation of mRNA poly(A) tail length governs mammalian body plan formation in gastruloids.

David Taborsky, Fabiola Valdivia-Francia, Pablo Serrano, Sukalp Muzumdar, Neguin Ranjbar, Laura Llop-Grau, Guillermo Tellez, Pjeter Gjonlleshaj, Clara Duré, Peter F Renz and 10 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

David TaborskyInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Fabiola Valdivia-FranciaInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.ORCID 0000-0002-9338-2225
Pablo SerranoInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Sukalp MuzumdarInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Neguin RanjbarInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Laura Llop-GrauInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Guillermo TellezInstitute for Molecular and Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, Schwerzenbach, Switzerland.
Pjeter GjonlleshajInstitute for Molecular and Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, Schwerzenbach, Switzerland.
Clara DuréInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Peter F RenzInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Ramona WeberInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Merve YigitInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Umesh GhoshdastiderInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.
Aleksei MironovBiozentrum, University of Basel, Basel, Switzerland.
Katie HyamsInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland.ORCID 0009-0003-1454-0868
Stefano VianelloInstitute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0000-0002-4152-8990
Mihaela ZavolanBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-8832-2041
Ori Bar-NurInstitute for Molecular and Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, Schwerzenbach, Switzerland.ORCID 0000-0002-6466-3124
Matthias P LutolfInstitute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0000-0002-5898-305X
Ataman SendoelInstitute for Regenerative Medicine (IREM), University of Zurich, Schlieren-Zurich, Switzerland. ataman.sendoel@uzh.ch.ORCID 0000-0002-0381-9965

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The establishment of the body plan during gastrulation represents a hallmark of animal life. It emerges from the interplay of gene-regulatory programs and positional cues, yet how these signals are integrated post-transcriptionally remains largely unexplored. Here, we combine the scalability of mouse gastruloids with a single-cell CRISPR screening platform to functionally dissect germ layer specification at single-cell transcriptomic resolution. Focusing on post-transcriptional regulation, we systematically map drivers of mesodermal and endodermal fate and identify the deadenylase Cnot8. Loss of Cnot8 leads to widespread poly(A) tail elongation and transcript stabilization, shifting mesoderm differentiation toward ectopic notochord fate, thereby profoundly impacting axial patterning. Collectively, our findings identify mRNA deadenylation as a fundamental mechanism linking cellular identity with morphogenetic signaling during mammalian body plan formation.

Indexed as

Body PatterningGastrulaGastrulationPoly ARNA, MessengerAnimalsCell DifferentiationEndodermGene Expression Regulation, DevelopmentalMesodermMiceNotochordPoly ARNA, Messenger

Identifiers

PMID42816481
PMCPMC13627704

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.