Evidence map›Paper›PMID 42830327›Full record

ArticleNature communications2026

Multi-stage single-cell atlas of a chordate non-embryonic development unveils dedifferentiating bud founder cells.

Marie Lebel, Solène Marchal, Tiphaine Sancerni, Sharon Rabiteau, Pragati Sharma, Tal D Scully, Estelle Balissat, Laurel S Hiebert, Anthony W De Tomaso, Allon M Klein and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marie LebelLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.ORCID 0000-0003-0150-0384
Solène MarchalLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.
Tiphaine SancerniLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.
Sharon RabiteauLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.
Pragati SharmaLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.
Tal D ScullyDepartment of Systems Biology, Harvard Medical School, Boston, MA, USA.
Estelle BalissatLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.ORCID 0009-0000-4708-8941
Laurel S HiebertMolecular, Cellular and Developmental Biology, University of California, Santa Barbara, CA, USA.ORCID 0000-0001-7756-1066
Anthony W De TomasoMolecular, Cellular and Developmental Biology, University of California, Santa Barbara, CA, USA.ORCID 0000-0001-9689-7673
Allon M KleinDepartment of Systems Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-8913-7879
Alexandre AliéLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France.
Stefano TiozzoLaboratoire de Biologie du Développement de Villefranche-sur-Mer (LBDV), UMR7009, CNRS, Sorbonne Université, 06230, Villefranche-sur-Mer, France. stefano.tiozzo@imev-mer.fr.ORCID 0000-0003-2822-2783

Funding

Allorecognition, parasitic stem cells and regeneration in a basal chordateR35GM139649 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI DE TOMASO, ANTHONY W · 2021 to 2025
$2.4M
Micro-capsule technology for high-throughput analyses of cell-cell interactionsR01GM153805 · NIGMS · HARVARD MEDICAL SCHOOL · PI Allon Moshe Klein · 2024 to 2026
$1.1M
Agence Nationale de la Recherche (French National Research Agency) ANR-24-CE02-2277Centre National de la Recherche Scientifique (National Center for Scientific Research) INSB AAP AIN 2023NIGMS NIH HHS R01 GM153805NIGMS NIH HHS R35 GM139649U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01GM153805U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM139649
6 · The paper itself

Abstract

Colonial tunicates are the only chordates capable of forming fully functional bodies from somatic tissues through non-embryonic development, or budding. In Botryllus schlosseri, budding produces new individuals (zooids) from a portion of the peribranchial epithelium of a preexisting zooid. While the anatomy of this process has been described in detail, the cellular and molecular mechanisms underpinning bud initiation remain elusive. Here, we present a multi-stage single-cell transcriptomic atlas of a non-embryonic development in a chordate, capturing initiation and development of zooids. We identify an epithelial founder cell population that gains developmental potential through possible dedifferentiation, challenging the long-standing hypothesis that a long-lived, circulating pluripotent stem cell drives new zooid formation. Although some circulating cells exhibit stem-like expression profiles, these populations are either hematopoietic or germline restricted lineages. This atlas provides a foundational resource for understanding the cellular origin and mechanisms underlying agametic development and possibly whole-body regeneration in chordates.

Indexed as

Cell DedifferentiationUrochordataAnimalsCell LineageEpithelial CellsGene Expression Regulation, DevelopmentalPluripotent Stem CellsSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisTranscriptome

Identifiers

PMID42830327
PMCPMC13635237

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.