Evidence map›Paper›PMID 42862471›Full record

ReviewInfection2026

Gut microbiota dysbiosis in patients with sepsis: a meta-analysis of microbial diversity and taxonomic abundance.

Jiaqi Lou, Houchen Liu, Ziyi Xiang, Rui Guo, Yirang Chen, Jiliang Li, Xin Le

Abstract readReview
PubMed Publisher
In one paragraph

Review in Infection, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jiaqi LouMicrobial Genetics, Interfaculty Institute of Microbiology and Infection Medicine Tübingen (IMIT), University of Tübingen, 72076, Tübingen, Germany. louregain@163.com.ORCID https://orcid.org/0000-0003-1316-7507
Houchen LiuMicrobial Genetics, Interfaculty Institute of Microbiology and Infection Medicine Tübingen (IMIT), University of Tübingen, 72076, Tübingen, Germany.
Ziyi XiangInstitute of Pathology, Faculty of Medicine, University of Bonn, 53127, Bonn, Germany.
Rui GuoFaculty of Medicine, University of Tübingen, 72076, Tübingen, Germany.
Yirang ChenFaculty of Medicine, University of Tübingen, 72076, Tübingen, Germany.
Jiliang LiBurn Department, Ningbo No. 2 Hospital, Wenzhou Medical University, Ningbo, 315010, Zhejiang Province, China.
Xin LeBurn Department, Ningbo No. 2 Hospital, Wenzhou Medical University, Ningbo, 315010, Zhejiang Province, China. 13094991@qq.com.

Funding

HwaMei Research Foundation of Ningbo No.2 Hospital 2023HMZD07Medical and Health Science Program of Zhejiang Province 2025HY0993Medical Scientific Research Foundation of Zhejiang Province No. 2025KY1395, No. 2025KY1443Ningbo Health Youth Technical Backbone Talent Development Program 2024RC-QN-02Ningbo Top Medical and Health Research Program 2023030615Project of NINGBO Leading Medical & Health Discipline 2022-F17Scientific Research Fund of Zhejiang Provincial Education Department No. Y202140685, No. Y202456684Zhejiang Clinovation Pride CXTD202502004Zhu Xiu Shan Talent Project of Ningbo No.2 Hospital 2023HMYQ25
6 · The paper itself

Abstract

backgroundGut microbiota alterations are frequently reported in sepsis, but their magnitude, consistency, and clinical specificity remain uncertain. We evaluated microbial diversity and taxonomic abundance in patients with sepsis, distinguishing healthy/reference controls from nonseptic clinical comparators.

methodsPubMed, Embase, Cochrane Library, and Web of Science Core Collection were searched from inception to 20 September 2026, without language or geographic restrictions, supplemented by targeted retrieval of primary studies and supplementary data. Comparative human observational studies were included. Standardized mean differences (Hedges g) and 95% confidence intervals (CIs) were pooled using random-effects models. Healthy/reference and nonseptic clinical controls were analyzed separately. Subgroup and sensitivity analyses were performed to explore heterogeneity and assess the stability of pooled estimates. Small-study effect tests and meta-regression were restricted to outcomes with sufficient studies.

resultsTwenty-three studies comprising 1201 participants were included. Compared with healthy/reference controls, patients with sepsis had lower Shannon diversity (20 studies; g = - 1.12, 95% CI - 1.38 to - 0.85; I² = 59.9%) and lower Firmicutes abundance (g = - 0.78, 95% CI - 1.32 to - 0.24), but higher Proteobacteria (g = 0.96, 95% CI 0.67 to 1.25) and Enterococcus abundance (g = 0.68, 95% CI 0.38 to 0.98). These associations remained statistically significant after correction for multiple comparisons. Estimates for the remaining outcomes were less consistent or imprecise. The reduction in Shannon diversity was smaller against nonseptic clinical controls (eight studies; g = - 0.29, 95% CI - 0.54 to - 0.05) and was not statistically significant after multiplicity correction.

conclusionsSepsis was associated with reduced gut microbial diversity and alterations in selected bacterial taxa, most consistently in comparisons with healthy/reference controls. Clinical heterogeneity and incomplete control of antibiotic exposure and illness severity limit attribution of these changes to sepsis itself. Prospective studies are needed to establish their prognostic and therapeutic relevance.

Indexed as

Critical illnessDysbiosisGut microbiotaMeta-analysisSepsis

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.