Evidence map›Paper›PMID 42881157›Full record

ArticleNature communications2026

Hierarchical regulation of oxygen-sensing through coupled transducers in Arabidopsis thaliana.

Isabel Manrique-Gil, Charlene Dambire, Susana Ubeda-Tomás, Gunjan Sharma, Mohamad Abbas, Cristina Sousa Correia, Andrea Bombana, Ranjan Swarup, Nicholas J Mitchell, Neil J Oldham and 1 more

Abstract read
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Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Isabel Manrique-Gil *School of Biosciences, University of Nottingham, Loughborough, UK.ORCID http://orcid.org/0000-0002-5034-662X
Charlene Dambire *School of Biosciences, University of Nottingham, Loughborough, UK.ORCID http://orcid.org/0000-0002-7184-2729
Susana Ubeda-Tomás *School of Biosciences, University of Nottingham, Loughborough, UK.
Gunjan Sharma *School of Biosciences, University of Nottingham, Loughborough, UK.ORCID http://orcid.org/0000-0001-5304-8081
Mohamad AbbasSchool of Biosciences, University of Nottingham, Loughborough, UK.
Cristina Sousa CorreiaSchool of Biosciences, University of Nottingham, Loughborough, UK.
Andrea BombanaSchool of Chemistry, University of Nottingham, University Park, Nottingham, UK.
Ranjan SwarupSchool of Biosciences, University of Nottingham, Loughborough, UK.ORCID http://orcid.org/0000-0002-6438-9188
Nicholas J MitchellSchool of Chemistry, University of Nottingham, University Park, Nottingham, UK.
Neil J OldhamSchool of Chemistry, University of Nottingham, University Park, Nottingham, UK.ORCID http://orcid.org/0000-0001-8024-4563
Michael J HoldsworthSchool of Biosciences, University of Nottingham, Loughborough, UK. michael.holdsworth@nottingham.ac.uk.ORCID http://orcid.org/0000-0002-3954-9215

Funding

RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/R002428/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/W013967/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/X014258/1
6 · The paper itself

Abstract

The sensing of molecular oxygen is an essential component of development and environmental response in both animals and plants. Few substrates of the plant oxygen-sensing PLANT CYSTEINE OXIDASE (PCO) N-degron pathway have been identified. Here we show that HYPOXIA TRANSDUCER1 (HYT1, previously named HYPOXIA-RESPONSIVE UNKNOWN PROTEIN, HUP40), an angiosperm-specific tail anchored-domain protein, is a substrate of this pathway through a Cys-2 dependent N-degron. HYT1 is stabilised in response to acute hypoxia in root tissues and is associated with the endoplasmic reticulum and nucleus. Genetic evidence shows that HYT1 is an important component in the transduction of oxygen-sensing, required for tolerance to acute hypoxia and other stress responses. Expression of HYT1 is directly activated by group VII ETHYLENE RESPONSE FACTOR transcription factors (ERFVIIs), that are also pathway substrates. The relationship between ERFVIIs and HYT1 has properties of a coherent feed-forward loop initiated and maintained by hypoxia, providing a mechanism to ensure robust response to reduced oxygen.

Indexed as

ArabidopsisArabidopsis ProteinsOxygenDegronsEndoplasmic ReticulumGene Expression Regulation, PlantPlant RootsSignal TransductionTranscription FactorsArabidopsis ProteinsOxygenTranscription Factors

Identifiers

PMID42881157

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.